Discover the best Genomics open source repositories on GitHub. Explore trending tools, live star counts, source code, and developer projects updated daily.
Turn scattered health data into answers you can trace. Self-hosted AI health data engine for lab reports, wearables and genetics, with a built-in MCP server. Run it with Docker and one LLM key, or keep every model local on llama.cpp.
BioMCP: Biomedical Model Context Protocol
Python library to handle Gene Ontology (GO) terms
Cloud-native genomic dataframes and batch computing
MISO: An open-source LIMS for NGS sequencing centres
C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings
Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)
Source code for JBrowse 2, a modern React-based genome browser
Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).
A cool place to store your Hi-C
An ontology of cell types
A structural variation pipeline for short-read sequencing
Genomics Extension for SQLite
A genome diagram generator for microbes and organelles