What are the best Biology repositories on GitHub?

The top-ranked Biology open source repositories include Opentrons/opentrons, histolab/histolab, Binomica-Labs/SpliceCraft, tracked and evaluated by community adoption, stars, and code commits.

How do I find trending Biology open source tools?

Browse this curated Biology directory to monitor real-time GitHub star velocity, latest code releases, and rising developer tools updated daily.

Are Biology GitHub repositories free and open source?

Most Biology projects listed here are distributed under open source licenses (such as MIT, Apache 2.0, or GPL). Always check individual project repositories for exact license terms.

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Biology GitHub Repositories (2026) · Open Source Tools

Discover the best Biology open source repositories on GitHub. Explore trending tools, live star counts, source code, and developer projects updated daily.

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9 matching projects · updated Nov 13, 2026 How we rank ↗

#1 TRENDING Opentrons/opentrons Python 2015

Software for writing protocols and running them on the Opentrons Flex and Opentrons OT-2

◇ biology ◇ robotics ◇ science

212 ↑ +3 today

528

#2 TRENDING histolab/histolab Python 2020

Library for Digital Pathology Image Processing

◇ bioinformatics ◇ biology ◇ data-science ◇ digital-pathology

67 ↑ +1 today

467

#3 TRENDING Binomica-Labs/SpliceCraft Python NEW 2026

Terminal-based plasmid map viewer, sequence editor, and cloning/mutagenesis workbench in pure Python

◇ bioengineering ◇ biology ◇ biopython ◇ cloning

18 ↑ +1 today

252

#4 TRENDING helicalAI/helical Python 2024

A framework for state-of-the-art pre-trained bio foundation models on genomics and transcriptomics modalities.

◇ artificial-intelligence ◇ bioinformatics ◇ biology ◇ deep-learning

40 ↑ +1 today

234

#5 TRENDING BioDynaMo/biodynamo C++ 2016

BioDynaMo is a high-performance and modular, agent-based simulation platform.

◇ agent-based ◇ agent-based-framework ◇ agent-based-modelling ◇ biology

74 ↑ +1 today

137

#6 TRENDING sanger/sequencescape Ruby 2011

Web based LIMS

◇ biology ◇ lims ◇ rails ◇ ruby

35 ↑ +1 today

111

#7 TRENDING Garinmckayl/anima JavaScript NEW 2026

Anima: a Claude Code skill that turns a biology idea into an interactive, sourced, isometric figure. Dopamine receptors, stimulants, addiction circuits, semaglutide.

◇ biology ◇ claude-code ◇ claude-skill ◇ data-visualization

8 ↑ +1 today