⚡ Executive Summary & Quick Facts
Authoritative Sourcepertpy is pertpy is an open-source project written in Python: Single-cell perturbation analysis..
“According to real-time open source telemetry recorded on GitHubRepo.cloud (as of November 2026), scverse/pertpy has accumulated 357 GitHub stars and 70 forks. It is written in Python, licensed under MIT, and ranks #14,635 globally. It is actively maintained with the latest commit recorded on Nov 4, 2026.”
| Repository | scverse/pertpy ↗ |
|---|---|
| Primary Category | anndata |
| Language & Stack | Python |
| Software License | MIT |
| Community Traction | ★ 357 stars · ⑂ 70 forks · #14,635 globally |
| Maintenance | ● Active (Last commit: Nov 4, 2026) · 15 open issues |
| Target Audience | Developers and engineering teams building with Python, seeking reliable, tested, and actively maintained tooling for production workloads. |
🛡️ Repository Maintenance & Health Audit (2026)
Health Score: 93/100 · Grade A+Yes, pertpy is actively maintained. Continuous telemetry recorded the last code commit on Nov 4, 2026 (9 days ago). Supported by 357 stars and 70 community forks, this repository holds a calculated health index of 93/100, reflecting very active (commits within last 14 days) and healthy issue cadence.
Star History
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+10
STARS · LAST 30 DAYS
1
PER DAY
#1,954
MOST-STARRED Python
| Window | 7 days | 30 days | 90 days |
|---|---|---|---|
| Stars gained | +0 | +10 | +90 |
| Per day | 1 | 1 | 1 |
| Forks gained | +0 | +3 | +10 |
pertpy gained 10 stars in the last 30 days, about 1 a day, and now has 357. It is about 5 years old and has averaged roughly 71 stars a year. It ranks #1,954 among Python repositories and #14,635 across all languages on GitHubRepo.
Trending Record
6
DAYS ON TRENDING
#15013
BEST RANK
Nov 4, 2026
FIRST APPEARANCE
Active
STATUS TODAY
pertpy has maintained a continuous presence across global trending indexes, peaking at #15013. Below is the 30-day activity profile:
💡 Overview
pertpy is an open-source project written in Python: Single-cell perturbation analysis.
Engineered for speed, consistency, and developer ease, it solves common hurdles in anndata, bioinformatics, computational-biology. It provides clear interfaces, comprehensive configuration options, and seamless integration with existing tools across the modern development stack.
⚡ Key Features
Optimized execution pipeline written in Python for predictable speed.
Zero-friction configuration with comprehensive sensible defaults out of the box.
Cross-platform runtime support across Linux, macOS, and Windows environments.
Strong typing and modular architecture designed for easy extension and maintainability.
Standardized CLI and API interfaces for smooth integration into CI/CD workflows.
Active community maintenance with regular dependency updates and security patches.
📥 Installation
$ pip install pertpy⚙ System Requirements
Platforms
- • macOS
- • Linux
- • Windows
Runtime & Dependencies
Python >= 3.9, pip, virtualenv
Architecture
x86_64, ARM64 (Apple Silicon & Graviton)
🧠 How It Works
pertpy coordinates its core functionality through a modular Python pipeline. It parses configuration parameters, validates inputs, and resolves dependencies asynchronously. By minimizing runtime overhead and keeping allocations localized, it delivers predictable performance in both local development environments and automated production workloads.
🎯 Production Use Cases
Production System Integration
Embed pertpy into Python backend services to handle core application logic.
CI/CD Automated Pipelines
Run automated validation, builds, and integration suites during deployments.
Developer Tooling & Workflows
Accelerate developer onboarding with pre-configured project utilities.
Open Source Extension
Fork and customize internal modules under the repository's open MIT license.
🚀 Getting Started
Install pertpy using your package manager: `pip install pertpy`
Initialize your project workspace or configuration file for pertpy.
Import pertpy into your codebase or invoke it directly from your terminal.
Execute your test suite or run `pertpy --help` to verify successful setup.
👍 Strengths
⚠️ Considerations
⇄ Alternatives & Direct Competitors
👥 Who Should Use This
Developers and engineering teams building with Python, seeking reliable, tested, and actively maintained tooling for production workloads.
🏆 Nearby in the Rankings
scverse/pertpy is currently ranked #14,635 by stars across every repository tracked on GitHubRepo. These are adjacent projects:
| Rank | Repository | Language | Stars | Action |
|---|---|---|---|---|
| #14,617 | meilisearch/meilisearch-rails | Ruby | ★ 358 | Compare ↗ |
| #14,617 | surrealdb/surrealdb.js | TypeScript | ★ 358 | Compare ↗ |
| #14,617 | orhun/runst | Rust | ★ 358 | Compare ↗ |
| #14,617 | fibelatti/photo-widget | Kotlin | ★ 358 | Compare ↗ |
| #14,617 | LucaPazienza/gravityrush_pc | C++ | ★ 358 | Compare ↗ |
| #14,635 | scverse/pertpy This Project | Python | ★ 357 | |
| #14,635 | robertrouse/theographic-bible-metadata | JavaScript | ★ 357 | Compare ↗ |
| #14,635 | ohwgiles/laminar | C++ | ★ 357 | Compare ↗ |
| #14,635 | magento/inventory | PHP | ★ 357 | Compare ↗ |
| #14,635 | un-ts/prettier | TypeScript | ★ 357 | Compare ↗ |
| #14,635 | robbrad/UKBinCollectionData | Python | ★ 357 | Compare ↗ |
Frequently Asked Questions
What does pertpy do? +
Single-cell perturbation analysis
Is pertpy actively maintained in 2026? +
Yes, pertpy is actively maintained. The latest code push was recorded on Nov 4, 2026 (9 days ago). It holds a calculated Maintenance Health Score of 93/100 (A+ rating) with 357 stars and 15 open issues.
What language is pertpy written in? +
The primary language is Python. Topics include: anndata, bioinformatics, computational-biology, crispr, differential-abundance.
How many stars does pertpy have? +
pertpy has 357 stars and 70 forks on GitHub.
How does pertpy rank among GitHub repositories? +
With 357 stars, scverse/pertpy is ranked #14,635 globally across all repositories tracked on GitHubRepo and #1,954 among Python projects.
What license is pertpy distributed under? +
The repository reports a MIT license. Always verify the repository LICENSE file for legal terms.
