RobersonLab/paired_end_demux
Illumina FASTQ files as input and splits into individual indexed samples.
Functions that allow direct differential expression testing of 1 versus 1 array using the average intensities, bead count, standard errors and detection p-values. Requires beadarray.
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Illumina FASTQ files as input and splits into individual indexed samples.
Python script for demultiplexing single-end sequencing into individual FASTQ files by index.
Lab static site
Really hacky way to remove adapters from NGS while keeping reads in order. Recommend alt strategy with cutadapt instead.