gkno/snpEff
Mirror of snpEff variant annotation and effect prediction tool.
Developer Profile
gkno
Discovered public repositories for gkno in the GitHub catalog.
gkno/verifyBamID
Public repository.
gkno/parseSequenceIndex
Parse a 1000G sequence index and produce files for use with gkno
gkno/qplot
qplot
gkno/bwa
Burrow-Wheeler Aligner
gkno/RUFUS
RUFUS k-mer based genomic variant detection
gkno/fastQValidator
Validate FastQ Files
gkno/Jellyfish
A fast multi-threaded k-mer counter
gkno/blast
Helper repo for fetching NCBI BLAST binaries (http://blast.ncbi.nlm.nih.gov/Blast.cgi)
gkno/configurationClass
Library for handling tool and pipeline configuration files
gkno/seqan
Mirror of SeqAn SVN for use in gkno package
gkno/bamUtil
Public repository.
gkno/libStatGen
Useful set of classes for creating statistical genetic programs.
gkno/Tangram
Fast Structural Variation Detection Toolbox
gkno/mutatrix
genome simulation across a population with zeta-distributed allele frequency, snps, insertions, deletions, and multi-nucleotide polymorphisms
gkno/tabix
Public repository.
gkno/vcflib
a simple C++ library for parsing and manipulating VCF files
gkno/resources-homo_sapiens
gkno resources for Homo sapiens
gkno/resources-tutorial
gkno resources for use in tutorials
gkno/picard
Mirror of Picard SVN for use in gkno package
gkno/gkno_launcher
The gkno launcher for executing tools or pipelines
gkno/Complete-striped-Smith-Waterman-library
Public repository.
gkno/MOSAIK
reference-guided aligner for next-generation sequencing technologies
gkno/bamtools
C++ API & command-line toolkit for working with BAM data
gkno/freebayes
Bayesian haplotype-based polymorphism discovery and genotyping.
gkno/gkno.github.com
Public repository.