gkno/bamaddrg
adds sample names and read-group (RG) tags to BAM alignments
The gkno launcher for executing tools or pipelines
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adds sample names and read-group (RG) tags to BAM alignments
samblaster: a tool to mark duplicates and extract discordant and split reads from sam files.
A tool set for short variant discovery in genetic sequence data.
lumpy: a general probabilistic framework for structural variant discovery