uhjish/4man
flask and angular spa
Allows visualization of a DNA sequence with both positive and negative scores at a given base, for example sense and antisense coverage in sequencing. Shows a zoomable stacked bar graph for the scores, displays other features (ex: promoters, SNPs) as horizontal bars that can be clicked and zoomed into. Also shows the sequence relevant to the selection. Demo: Allows visualization of a DNA sequence with both positive and negative scores at a given base, for example sense and antisense coverage in sequencing. Shows a zoomable stacked bar graph for the scores, displays other features (ex: promoters, SNPs) as horizontal bars that can be clicked and zoomed into. Also shows the sequence relevant to the selection. Demo: http://biobits.net/luigi/
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flask and angular spa
inbedby11.github.com
Decompose SNPs into haplotype blocks and perform linkage disequilibrium analysis (HDF5, Python)
JS UI to browse the SNPs found in a genome sequencing run