sharpton/meta-qc
A QC pipeline for shotgun metagenomic data derived from host-associated microbial communities (i.e., microbiomes)
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Discovered Sep 24, 2026
sharpton / pplacer
Phylogenetic placement tool
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More from sharpton
sharpton/metatrans
Public repository.
sharpton/quickclass
Conducts a quick and dirty classification of DNA sequences into protein families. Takes demultiplexed Illumina fastq data, organizes it into sample categories, pushes the data to an SGE cluster, process it with LAST using a precomputed protein family database, and parses the result to identify the number of copies of each family in each sample.
sharpton/SRAdb_tools
Public repository.