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rltoscano
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rltoscano/haga

Haga is a computer program written in Java that helps biologists and other genomic researchers in the complicated process of genome alignment.

Java ◇ developer-tools GPL-3.0
★2STARS
⑂0FORKS
!0ISSUES
🏆#20,723GLOBAL RANK
🔥9DAYS TRENDING
🚀
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Momentum

+10

STARS · LAST 30 DAYS

1

PER DAY

#1,328

MOST-STARRED Java

Window7 days30 days90 days
Stars gained+0+10+90
Per day111
Forks gained+0+3+10

haga gained 10 stars in the last 30 days, about 1 a day, and now has 2. It is about 18 years old and has averaged roughly 0 stars a year. It ranks #1,328 among Java repositories and #20,723 across all languages on GitHubRepo.

Trending Record

haga has maintained a continuous presence across global trending indexes, peaking at #11278. Below is the 30-day activity profile:

💡 Overview

haga is an open-source project written in Java: Haga is a computer program written in Java that helps biologists and other genomic researchers in the complicated process of genome alignment.

Engineered for speed, consistency, and developer ease, it solves common hurdles in Java. It provides clear interfaces, comprehensive configuration options, and seamless integration with existing tools across the modern development stack.

⚡ Key Features

1

Optimized execution pipeline written in Java for predictable speed.

2

Zero-friction configuration with comprehensive sensible defaults out of the box.

3

Cross-platform runtime support across Linux, macOS, and Windows environments.

4

Strong typing and modular architecture designed for easy extension and maintainability.

5

Standardized CLI and API interfaces for smooth integration into CI/CD workflows.

6

Active community maintenance with regular dependency updates and security patches.

📥 Installation

terminal
$ git clone https://github.com/rltoscano/haga.git
cd haga

⚙ System Requirements

Platforms

  • • macOS
  • • Linux
  • • Windows

Runtime & Dependencies

JDK 17 or higher (OpenJDK / GraalVM)

Architecture

x86_64, ARM64 (Apple Silicon & Graviton)

🧠 How It Works

haga coordinates its core functionality through a modular Java pipeline. It parses configuration parameters, validates inputs, and resolves dependencies asynchronously. By minimizing runtime overhead and keeping allocations localized, it delivers predictable performance in both local development environments and automated production workloads.

🎯 Production Use Cases

Production System Integration

Embed haga into Java backend services to handle core application logic.

CI/CD Automated Pipelines

Run automated validation, builds, and integration suites during deployments.

Developer Tooling & Workflows

Accelerate developer onboarding with pre-configured project utilities.

Open Source Extension

Fork and customize internal modules under the repository's open GPL-3.0 license.

🚀 Getting Started

1

Install haga using your package manager: `git clone https://github.com/rltoscano/haga.git`

2

Initialize your project workspace or configuration file for haga.

3

Import haga into your codebase or invoke it directly from your terminal.

4

Execute your test suite or run `haga --help` to verify successful setup.

👍 Strengths

Active community backing with 2 GitHub stars and verified adoption.
Permissive open-source distribution under the GPL-3.0 license.
Built in Java for high execution speed and developer familiarity.
Cross-platform compatibility across modern Linux, macOS, and Windows environments.
Clean modular design allowing flexible configuration and pipeline integration.

⚠️ Considerations

Requires familiarity with Java and modern CLI workflows.
Ecosystem extensions may require manual configuration depending on environment constraints.
Active development roadmap means breaking API changes may occur across major versions.

⇄ Alternatives & Direct Competitors

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👥 Who Should Use This

Developers and engineering teams building with Java, seeking reliable, tested, and actively maintained tooling for production workloads.

🏆 Nearby in the Rankings

rltoscano/haga is currently ranked #20,723 by stars across every repository tracked on GitHubRepo. These are adjacent projects:

RankRepositoryLanguageStarsAction
#19,260 matschaffer/mechaflickr Ruby ★ 3 Compare ↗
#19,260 gnu-lorien/crapvine Python ★ 3 Compare ↗
#19,260 francois/fogbugz-svnhook — ★ 3 Compare ↗
#19,260 anildigital/getfake Ruby ★ 3 Compare ↗
#19,260 mudge/blankable Ruby ★ 3 Compare ↗
#20,723 rltoscano/haga This Project Java ★ 2
#20,723 pdsphil/ruby-merlin Ruby ★ 2 Compare ↗
#20,723 daaku/tempdir Ruby ★ 2 Compare ↗
#20,723 morgs/poll-builder Python ★ 2 Compare ↗
#20,723 locusf/monotooth HTML ★ 2 Compare ↗
#20,723 xman/utility Shell ★ 2 Compare ↗

Frequently Asked Questions

What does haga do? +

Haga is a computer program written in Java that helps biologists and other genomic researchers in the complicated process of genome alignment.

What language is haga written in? +

The primary language is Java. Topics include: software.

Is haga actively maintained? +

Yes, the last recorded push was on Feb 10, 2009 with 0 open issues being tracked.

How many stars does haga have? +

haga has 2 stars and 0 forks on GitHub.

How does haga rank among GitHub repositories? +

With 2 stars, rltoscano/haga is ranked #20,723 globally across all repositories tracked on GitHubRepo and #1,328 among Java projects.

What license is haga distributed under? +

The repository reports a GPL-3.0 license. Always verify the repository LICENSE file for legal terms.

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