refresh-bio/agc
Assembled Genomes Compressor (AGC) squeezing 290 GB of Human Pangenome Project assemblies down to <1.5 GB (>190× ratio), with sample and contig extraction in seconds.
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+10
STARS · LAST 30 DAYS
1
PER DAY
#727
MOST-STARRED C++
| Window | 7 days | 30 days | 90 days |
|---|---|---|---|
| Stars gained | +7 | +10 | +90 |
| Per day | 1 | 1 | 1 |
| Forks gained | +1 | +3 | +10 |
agc gained 10 stars in the last 30 days, about 1 a day, and now has 187. It is about 5 years old and has averaged roughly 37 stars a year. It ranks #727 among C++ repositories and #9,742 across all languages on GitHubRepo.
Trending Record
1
DAYS ON TRENDING
#9140
BEST RANK
Oct 5, 2026
FIRST APPEARANCE
Active
STATUS TODAY
agc has maintained a continuous presence across global trending indexes, peaking at #9140. Below is the 30-day activity profile:
💡 Overview
agc is an open-source project written in C++: Assembled Genomes Compressor (AGC) squeezing 290 GB of Human Pangenome Project assemblies down to <1.5 GB (>190× ratio), with sample and contig extraction in seconds.
Engineered for speed, consistency, and developer ease, it solves common hurdles in compression, compression-algorithm, fasta. It provides clear interfaces, comprehensive configuration options, and seamless integration with existing tools across the modern development stack.
⚡ Key Features
Optimized execution pipeline written in C++ for predictable speed.
Zero-friction configuration with comprehensive sensible defaults out of the box.
Cross-platform runtime support across Linux, macOS, and Windows environments.
Strong typing and modular architecture designed for easy extension and maintainability.
Standardized CLI and API interfaces for smooth integration into CI/CD workflows.
Active community maintenance with regular dependency updates and security patches.
📥 Installation
$ git clone https://github.com/refresh-bio/agc.git
cd agc⚙ System Requirements
Platforms
- • macOS
- • Linux
- • Windows
Runtime & Dependencies
C++20 compliant compiler (GCC 11+, Clang 13+, MSVC)
Architecture
x86_64, ARM64 (Apple Silicon & Graviton)
🧠 How It Works
agc coordinates its core functionality through a modular C++ pipeline. It parses configuration parameters, validates inputs, and resolves dependencies asynchronously. By minimizing runtime overhead and keeping allocations localized, it delivers predictable performance in both local development environments and automated production workloads.
🎯 Production Use Cases
Production System Integration
Embed agc into C++ backend services to handle core application logic.
CI/CD Automated Pipelines
Run automated validation, builds, and integration suites during deployments.
Developer Tooling & Workflows
Accelerate developer onboarding with pre-configured project utilities.
Open Source Extension
Fork and customize internal modules under the repository's open MIT license.
🚀 Getting Started
Install agc using your package manager: `git clone https://github.com/refresh-bio/agc.git`
Initialize your project workspace or configuration file for agc.
Import agc into your codebase or invoke it directly from your terminal.
Execute your test suite or run `agc --help` to verify successful setup.
👍 Strengths
⚠️ Considerations
⇄ Alternatives & Direct Competitors
👥 Who Should Use This
Developers and engineering teams building with C++, seeking reliable, tested, and actively maintained tooling for production workloads.
🏆 Nearby in the Rankings
refresh-bio/agc is currently ranked #9,742 by stars across every repository tracked on GitHubRepo. These are adjacent projects:
| Rank | Repository | Language | Stars | Action |
|---|---|---|---|---|
| #9,719 | personalrobotics/ssik | Python | ★ 188 | Compare ↗ |
| #9,719 | MorpheApp/morphe-patcher | Kotlin | ★ 188 | Compare ↗ |
| #9,719 | mkrueger/icy_tools | Rust | ★ 188 | Compare ↗ |
| #9,719 | MiniMax-AI/OpenAgentCore | Go | ★ 188 | Compare ↗ |
| #9,719 | husseinhareb/hw-monitor | TypeScript | ★ 188 | Compare ↗ |
| #9,742 | refresh-bio/agc This Project | C++ | ★ 187 | |
| #9,742 | Xu123-Bob/Baize | JavaScript | ★ 187 | Compare ↗ |
| #9,742 | dicom/ruby-dicom | Ruby | ★ 187 | Compare ↗ |
| #9,742 | wardencommunity/sinatra_warden | Ruby | ★ 187 | Compare ↗ |
| #9,742 | hebcal/hebcal | Go | ★ 187 | Compare ↗ |
| #9,742 | EnviroDIY/Arduino-SDI-12 | C++ | ★ 187 | Compare ↗ |
Frequently Asked Questions
What does agc do? +
Assembled Genomes Compressor (AGC) squeezing 290 GB of Human Pangenome Project assemblies down to <1.5 GB (>190× ratio), with sample and contig extraction in seconds.
What language is agc written in? +
The primary language is C++. Topics include: compression, compression-algorithm, fasta, genomes.
Is agc actively maintained? +
Yes, the last recorded push was on Oct 5, 2026 with 12 open issues being tracked.
How many stars does agc have? +
agc has 187 stars and 20 forks on GitHub.
How does agc rank among GitHub repositories? +
With 187 stars, refresh-bio/agc is ranked #9,742 globally across all repositories tracked on GitHubRepo and #727 among C++ projects.
What license is agc distributed under? +
The repository reports a MIT license. Always verify the repository LICENSE file for legal terms.
