gpratt/screed
a simple read-only sequence database, designed for short reads
create, manage, and upload track hubs for use in the UCSC genome browser
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a simple read-only sequence database, designed for short reads
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
Public repository.
Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)