gpratt/khmer
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
a simple read-only sequence database, designed for short reads
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In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
Public repository.
Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)
Nbconvert as a webservice (rendering ipynb to static HTML)