genomeannotation/annie
annie = ANNotation Information Extractor
Pipelines to analyze and correct reads, count kmers and assemble genomes -- meant to run on our local cluster
This repository is cataloged as part of our automated global GitHub synchronization. Full telemetry, velocity snapshots, and code summaries are scheduled for continuous enrichment.
annie = ANNotation Information Extractor
Cleans up annotation syntax to conform to NCBI standards
Start with a genome, single copy orthologs and SNPs; end with a list of the SNPpiest single copy ortholog exons in the genome
An OrthoMCL setup in a docker image