dmlond/mongo_agent_seed_reference
extends dmlond/bwa_alignment with an agent to update the mongo task with the reference and build
google_agent_base extension container application to automate parallel alignments using a ruby spreadsheet_agent system
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extends dmlond/bwa_alignment with an agent to update the mongo task with the reference and build
containerized application that can be run after seed to watch the progress of an alignment through its logs.
simple script to seed the demo alignment of the plasmodium data to the plasmodium reference
Ruby MongoAgent::Agent that monitors for merge_bam_agents tasks, and merges the specified subset_bams into a single bam file