dariogf/scbi_zcat
Gem to read a multiple stream gz file using a zcat pipe
A Ruby gem to handle ACE files
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Gem to read a multiple stream gz file using a zcat pipe
Ruby gem to work with gene_ontology
Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved Domain Database and Nucleotide divisions, Gene Ontology, UniPathways and the Enzyme Commission. It gives information about the longest ORF (using DNA2PEP) and non-coding potential of the sequences (using Portrait). A final heuristic makes Annocript able to identify putative long non-coding RNAs among your transcripts.
Automatic web interface generator for command line applications