chr1swallace/orgmode-accessories
Add ons for orgmode
Tools to extract dendrogram plot data for use with ggplot
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Add ons for orgmode
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This repository contains R functions to compute the 'Conditional False Discovery Rate', a method to analyse genome-wide association studies (GWAS) for related diseases originally proposed by Andreasson et al (2013), in the case where the two GWAS have shared controls.These functions widen the scope of the existing technique and enable improved power.
simple fine mapping script in R used as the basis for analyses in Bowes et. al (2015), Dense genotyping of immune-related susceptibility loci reveals new insights into the genetics of psoriatic arthritis.