cbg-ethz/gespeR
Gene-Specific Phenotype EstimatoR
Here we analyse the PrimerID protocol in all its gory details.
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Gene-Specific Phenotype EstimatoR
Benchmarking data sets for haplotype reconstruction methods, sequenced with Illumina MiSeq, 454/Roche GSJunior, and Pacific Biosciences
QuasiFit is a Bayesian MCMC sampler for inferring fitness landscapes in the quasispecies model subject to mutation-selection equilibrium.
Computes a consensus sequence with wobbles, ambiguous bases, and in-frame insertions, from a NGS read alignment.