argriffing/yasb
yet another scipy benchmark
Python versions of nearest correlation matrix algorithms
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yet another scipy benchmark
ETE is a python programming toolkit that assists in the automated manipulation, analysis and visualization of any type of hierarchical trees. This includes phylogenetic trees, clustering results and profile-based trees. It supports node annotation, programatic tree drawing, circular visualization, SVG, PNG and PDF image rendering, and more!
Public repository.
Computes conditional summaries of continuous-time Markov processes on trees.