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PennLINC/qsiprep

Preprocessing of diffusion MRI

Python ◇ bids BSD-3-Clause
★191STARS
⑂63FORKS
!80ISSUES
🏆#5,296GLOBAL RANK
🔥5DAYS TRENDING
🚀
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Star History

Continuous Observations
Interactive star growth chart for PennLINC/qsiprep
CSV

Momentum

+10

STARS · LAST 30 DAYS

1

PER DAY

#615

MOST-STARRED Python

Window7 days30 days90 days
Stars gained+7+10+90
Per day111
Forks gained+1+3+10

qsiprep gained 10 stars in the last 30 days, about 1 a day, and now has 191. It is about 8 years old and has averaged roughly 24 stars a year. It ranks #615 among Python repositories and #5,296 across all languages on GitHubRepo.

Trending Record

qsiprep has maintained a continuous presence across global trending indexes, peaking at #2035. Below is the 30-day activity profile:

💡 Overview

qsiprep is an open-source project written in Python: Preprocessing of diffusion MRI.

Engineered for speed, consistency, and developer ease, it solves common hurdles in bids, denoising-images, diffusion-mri. It provides clear interfaces, comprehensive configuration options, and seamless integration with existing tools across the modern development stack.

⚡ Key Features

1

Optimized execution pipeline written in Python for predictable speed.

2

Zero-friction configuration with comprehensive sensible defaults out of the box.

3

Cross-platform runtime support across Linux, macOS, and Windows environments.

4

Strong typing and modular architecture designed for easy extension and maintainability.

5

Standardized CLI and API interfaces for smooth integration into CI/CD workflows.

6

Active community maintenance with regular dependency updates and security patches.

📥 Installation

terminal
$ pip install qsiprep

⚙ System Requirements

Platforms

  • • macOS
  • • Linux
  • • Windows

Runtime & Dependencies

Python >= 3.9, pip, virtualenv

Architecture

x86_64, ARM64 (Apple Silicon & Graviton)

🧠 How It Works

qsiprep coordinates its core functionality through a modular Python pipeline. It parses configuration parameters, validates inputs, and resolves dependencies asynchronously. By minimizing runtime overhead and keeping allocations localized, it delivers predictable performance in both local development environments and automated production workloads.

🎯 Production Use Cases

Production System Integration

Embed qsiprep into Python backend services to handle core application logic.

CI/CD Automated Pipelines

Run automated validation, builds, and integration suites during deployments.

Developer Tooling & Workflows

Accelerate developer onboarding with pre-configured project utilities.

Open Source Extension

Fork and customize internal modules under the repository's open BSD-3-Clause license.

🚀 Getting Started

1

Install qsiprep using your package manager: `pip install qsiprep`

2

Initialize your project workspace or configuration file for qsiprep.

3

Import qsiprep into your codebase or invoke it directly from your terminal.

4

Execute your test suite or run `qsiprep --help` to verify successful setup.

👍 Strengths

Active community backing with 190 GitHub stars and verified adoption.
Permissive open-source distribution under the BSD-3-Clause license.
Built in Python for high execution speed and developer familiarity.
Cross-platform compatibility across modern Linux, macOS, and Windows environments.
Clean modular design allowing flexible configuration and pipeline integration.

⚠️ Considerations

Requires familiarity with Python and modern CLI workflows.
Ecosystem extensions may require manual configuration depending on environment constraints.
Active development roadmap means breaking API changes may occur across major versions.

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👥 Who Should Use This

Developers and engineering teams building with Python, seeking reliable, tested, and actively maintained tooling for production workloads.

🏆 Nearby in the Rankings

PennLINC/qsiprep is currently ranked #5,296 by stars across every repository tracked on GitHubRepo. These are adjacent projects:

RankRepositoryLanguageStarsAction
#5,288 transferia/transferia Go ★ 192 Compare ↗
#5,288 rubenbe/opensoho Svelte ★ 192 Compare ↗
#5,288 SudoJacky/tinybot Rust ★ 192 Compare ↗
#5,288 veteranbv/inky-bird-frame Python ★ 192 Compare ↗
#5,288 qybaihe/mu TypeScript ★ 192 Compare ↗
#5,296 PennLINC/qsiprep This Project Python ★ 191
#5,296 evan/bleak_house Ruby ★ 191 Compare ↗
#5,296 itteco/service_merchant Ruby ★ 191 Compare ↗
#5,296 Ummon/D-LAN C++ ★ 191 Compare ↗
#5,296 learningequality/studio Python ★ 191 Compare ↗
#5,296 hbci4j/hbci4java Java ★ 191 Compare ↗

Frequently Asked Questions

What does qsiprep do? +

Preprocessing of diffusion MRI

What language is qsiprep written in? +

The primary language is Python. Topics include: bids, denoising-images, diffusion-mri, distortion-correction, motion-correction.

Is qsiprep actively maintained? +

Yes, the last recorded push was on Sep 27, 2026 with 80 open issues being tracked.

How many stars does qsiprep have? +

qsiprep has 191 stars and 63 forks on GitHub.

How does qsiprep rank among GitHub repositories? +

With 191 stars, PennLINC/qsiprep is ranked #5,296 globally across all repositories tracked on GitHubRepo and #615 among Python projects.

What license is qsiprep distributed under? +

The repository reports a BSD-3-Clause license. Always verify the repository LICENSE file for legal terms.

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