Ensembl/faidx_xs
Perl XS interface into htslib (superseded by https://github.com/Ensembl/Bio-DB-HTS)
The Ensembl Variation Perl API and SQL schema
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Perl XS interface into htslib (superseded by https://github.com/Ensembl/Bio-DB-HTS)
Genomic data exploration webtool
Specifications and implementation of the TrackHub registry
File parsing and writing code for Ensembl