Ensembl/ensembl-external
*DEPRECATED* Code to load external data in the Ensembl website
Developer Profile
Ensembl
Discovered public repositories for Ensembl in the GitHub catalog.
Ensembl/ensembl-killlist
Public repository.
Ensembl/ensembl-git-test
Dummy repository to test git operations and scripts
Ensembl/ensc-core
C API for the Ensembl Database
Ensembl/guiHive
Graphical interface for the eHive workflow manager
Ensembl/ensembl-doc
Archive documentation of the Ensembl infrastructure. Information here is probably out of date.
Ensembl/ensembl
The Ensembl Core Perl API and SQL schema
Ensembl/ensembl-production
Ensembl Production code
Ensembl/ensj-healthcheck
Ensembl's Automated QC Framework
Ensembl/ensembl-funcgen
Ensembl Funcgen Perl API and SQL schema
Ensembl/ensembl-variation
The Ensembl Variation Perl API and SQL schema
Ensembl/public-plugins
Plugins for an Ensembl website
Ensembl/ensembl-webcode
The code to run an Ensembl website
Ensembl/ensembl-draw
*DEPRECATED* Code to draw images on an Ensembl website
Ensembl/ensembl-orm
API for non genomic databases
Ensembl/ensembl-tools
Ensembl tools
Ensembl/ensembl-rest
Language agnostic RESTful data access to Ensembl data over HTTP
Ensembl/ensembl-test
Test libraries and harnesses used for running the Ensembl test suite
Ensembl/ensembl-pipeline
*DEPRECATED* Job management for the Ensembl Genebuild pipeline
Ensembl/ensembl-analysis
Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines
Ensembl/ensembl-xs
A collection of XS modules to be used with the Ensembl APIs
Ensembl/ensembl-database-loader
A eHive Pipeline for loading Ensembl and Ensembl Genomes databases to a MySQL compatible server
Ensembl/ensembl-hive
EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource
Ensembl/ensembl-git-tools
A collection of tools which Ensembl uses to work with Git
Ensembl/ensembl-compara
The Ensembl Compara Perl API and SQL schema
Ensembl/EpiRR
A registry of epigenomics reference data sets
Ensembl/cvs2git-wrap
A fork of the Anacode Git migration code re-worked for Ensembl
Ensembl/WiggleTools
Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency
Ensembl/VEP_plugins
Plugins for the Ensembl Variant Effect Predictor (VEP)
Ensembl/treebest
TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)