solgenomics/sweetpotatobase
Web interface for SweetPotatoBase website
Developer Profile
solgenomics
Discovered public repositories for solgenomics in the GitHub catalog.
solgenomics/ricebase
Public repository.
solgenomics/Tea
code and database for the expression query, mining, analysis, and visualization tools
solgenomics/arabidopsis
Public repository.
solgenomics/cyctools
Perl tool package to create pathologic files (.pf) for genomic and transcriptomic projects
solgenomics/avocado
Public repository.
solgenomics/zeabase
Public repository.
solgenomics/gbs
Public repository.
solgenomics/HadoopGBS
Public repository.
solgenomics/vitisbase
vitisbase-specific mason modules
solgenomics/Hdf5
A REST-based SNP server with an Hdf5 backend
solgenomics/opticon1004
Public repository.
solgenomics/theobroma
Public repository.
solgenomics/Bio-GenomeUpdate
Tools for updating a genome assembly
solgenomics/bio-geneticrelationships
Public repository.
solgenomics/Barcode-Code128
A Perl module to create barcodes in code 128 format, from
solgenomics/solGS
genomic selection tool
solgenomics/Intronfinder
Finds introns in transcript sequence
solgenomics/GenomicSelection
Code for the genomic selection module
solgenomics/PhygOmics
High throughput phylogenomic analysis pipeline
solgenomics/cassava
Cassavabase - A website for Cassava research
solgenomics/solgenomics.github.com
Solgenomics Github Website
solgenomics/starmachine
Shared management machinery for PSGI web apps running with Starman.
solgenomics/Chado-Feature-Pages
search and browse the details of features stored in a Chado database
solgenomics/bio-blast
low-level routines for dealing with BLAST formats and data
solgenomics/Bio-AGP
Public repository.
solgenomics/Ambikon-IntegrationServer
Request broker/proxy for web app integration. Early days still.
solgenomics/Ambikon
core classes for Ambikon, used by both integration server and subsite APIs
solgenomics/bio-gff3
fast, low-level GFF3 manipulation in Perl
solgenomics/catalyst-view-bio-seqio
Use Bio::SeqIO as a Catalyst view.
solgenomics/yapri
Yet Another Perl R Inteface.
solgenomics/Plack-App-Proxy
a streaming capable proxy for Plack
solgenomics/testing
Scratch repo to test jitterbug + git integration
solgenomics/bio-chado-schema
A standard DBIx::Class layer for the Chado database schema. Bootstrapped and updated using DBIx::Class::Schema::Loader.
solgenomics/bio-chado-loader
Load biological data into the Chado database with Bio::Chado::Schema
solgenomics/sgn-biotools
general bioinformatics tools, non-project-specific
solgenomics/biosource
Public repository.
solgenomics/sgn-home
per-developer versioned home directories for miscellaneous work
solgenomics/sgn-devtools
tools for SGN developers
solgenomics/gff3_validator
Validate GFF3 files
solgenomics/art
SGN artwork
solgenomics/SMMID
Code and content behind smmid.org
solgenomics/Cview
A comparative genetic map viewer
solgenomics/javacyc
Java interface to SRI Pathway Tools
solgenomics/perlcyc
Perl interface to Pathway Tools
solgenomics/cxgn-corelibs
Various Modules relating to SGN and Breedbase
solgenomics/sgn
The code behind the Sol Genomics Network, Cassavabase and other Breedbase websites
solgenomics/tomato_genome
Scripts and libraries for managing tomato genome data
solgenomics/Phenome
Scripts and libraries for managing the SGN Phenome database
solgenomics/ITAG
Management modules for ITAG (International Tomato Annotation Group) pipeline