matsen/onebox
A gem for turning URLs into website previews
Developer Profile
matsen
Discovered public repositories for matsen in the GitHub catalog.
matsen/babble
Public repository.
matsen/discourse
A platform for community discussion. Free, open, simple.
matsen/premp
Project templating using Mako.
matsen/notes
Notes from talks, etc.
matsen/evo2013index
A program, organized by topic, for the Evolution 2013 meeting. Made by a very hacky shell script.
matsen/reveal.js
The HTML Presentation Framework
matsen/sbreview
Systematic biology review article on phylogenetics and the human microbiome; associated with LIRMM conference
matsen/PhyloSift
Phylogenetic and taxonomic analysis for genomes and metagenomes
matsen/vim-ocaml
Packaging of Markus Mottl's Vim scripts for OCaml
matsen/pplacer-opam-repository
OPAM repository specific for pplacer build
matsen/snipmate.vim
snipMate.vim aims to be a concise vim script that implements some of TextMate's snippets features in Vim.
matsen/ubiquity_synonymity
Code to accompany the paper "Ubiquity of synonymity: almost all large binary trees are not uniquely identified by their spectra or their immanantal polynomials"
matsen/chefinator
Expedition menu planning
matsen/constnj
Code to accompany "constNJ: an Algorithm to Reconstruct Sets of Phylogenetic Trees Satisfying Pairwise Topological Constraints"
matsen/roguebme
Code to accompany "Polyhedral Geometry of Phylogenetic Rogue Taxa"
matsen/pplacer
Phylogenetic placement and downstream analysis