lydiasteiner/epimem
simulation program to simulate epigenetic memory using a hopfield network
Developer Profile
lydiasteiner
Discovered public repositories for lydiasteiner in the GitHub catalog.
lydiasteiner/DomainEvolution
skript cellection for analyzing domain evolution
lydiasteiner/mpcounts
Reconstruction of domain/gene counts using the maximum parsimony method: It requires that the tree exists as directory structure. The counts fo the leave nodes are expected to be in a file called mpcounts in the leave node's directories. First line is a header, first column contains the class name and the second column the counts of this class. So far, it reconstructs counts only for 10 clases (Wac,Wme,Wph,Wub,Rac,Rme,Rph,Eac,Eme,Eub). Any other class is ignored.
lydiasteiner/aerts-exercises-leipzig
Database and visualization exercises for Leipzig course "Programming for Evolutionary Biology"