itmat/itmat_archive
Simple Rails application to archive the metadata of old experiments (which are on a bunch of disks)
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itmat
Discovered public repositories for itmat in the GitHub catalog.
itmat/biopy-isatab
Python parser for ISAtab, a biological file format for experimental metadata
itmat/isareport
ISA-Report: Makes nice looking HTML reports from ISA-TAB annotated experiments
itmat/isatab-templates
ISATAB XML templates for use in ISACreator
itmat/pre-pade
Pre-PADE
itmat/collos
CollOS : Collection Of Samples - a lightweight biobanking tool
itmat/pade
Patterns from Gene Expression
itmat/aspirin_analysis
Aspirin Data Analysis on RoR
itmat/rum
RNA-Seq Unified Mapper
itmat/pgfi-hts
PGFI High Throughput Sequence Center Repo
itmat/qips-rmgr-web
Rails-based resource manager for QIPS (Computing pipeline utilizing AWS)
itmat/qips-node
Daemon Node for qips. Built with daemon-kit and uses SQS and Ruote workitems
itmat/daemon-kit
Daemon Kit aims to simplify creating Ruby daemons by providing a sound application skeleton (through a generator), task specific generators (jabber bot, etc) and robust environment management code.
itmat/qips
For informational purposes only. Serves as a pointer to other parts of QIPS
itmat/qinteract_archiver
archives qinteract data into iarchive
itmat/qips-node-amqp
Amqp version of qips node daemon. Uses daemon-kit
itmat/qips-wfmgr
Workflow manager for the queued informatics pipeline suite. works closely with qips-rmgr-web
itmat/qips-extras
collection of scripts or executables that fit into the qips framework
itmat/qinteract2
An Application that submits sequest and mascot searches, tpp analyses to a torque queue. Also manages the viewers for analyses results (second iteration)
itmat/thermo_msf
A parser for Thermo MSF files
itmat/chef-cookbooks
Chef cookbooks for various services not directly related to bioinformatics, but are related to it
itmat/bio-cookbooks
A Chef cookbooks repository for bioinformatics tools
itmat/hogenesch-lab-website
Hogenesch Lab Website
itmat/pennpipeline
UPENN Proteomics Analysis Pipeline