alimanfoo/vcfplt
Convenient plotting functions for working with variant call data.
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alimanfoo
Discovered public repositories for alimanfoo in the GitHub catalog.
alimanfoo/vcfnp
Load numpy arrays and HDF5 files from VCF (variant call format)
alimanfoo/smithwaterman
smith-waterman-gotoh alignment algorithm
alimanfoo/vcflib
a simple C++ library for parsing and manipulating VCF files
alimanfoo/pyvcfarray
Python utility functions for loading data from Variant Call Format (VCF) files into numpy arrays.
alimanfoo/PyVCF
A Variant Call Format reader for Python.
alimanfoo/pysamstats
A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM or BAM file.
alimanfoo/lookseq
lookseq
alimanfoo/csvvalidator
A small CSV validator library for Python.