Ecogenomics/CheckM
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Developer Profile
Ecogenomics
Discovered public repositories for Ecogenomics in the GitHub catalog.
Ecogenomics/PhylogeneticM
Feed the tree...
Ecogenomics/ionPairer
create a rough scaffold using ion torrent MP reads
Ecogenomics/mungeGG
Join a taxonomy to the greengenes database
Ecogenomics/FrankenQIIME
Feel the Franken
Ecogenomics/APP
Ace Pyrotag Pipeline - wrapper for QIIME and R - interfaces with PyroDB
Ecogenomics/scriptShed
sequence manipulation scripts that are actually useful
Ecogenomics/Normaliser
Perl program for normalising ecological data tables
Ecogenomics/bioscripts
A collection of scripts written by ACE members
Ecogenomics/Mannotator
Microbial annotation pipeline - in progress