vswilliamson/imputePipe
Impute to 1000 genomes efficiently by distributing to SGE, including alignment of target to reference, haplotyping, imputing, converting to plink format and filtering steps
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Impute to 1000 genomes efficiently by distributing to SGE, including alignment of target to reference, haplotyping, imputing, converting to plink format and filtering steps
scripts to enable imputation using mach admix
A collection of scripts and information pertaining to the research clusters maintained at VIPBG.
Spit4Science QC and data cleaning