tanglingfung/bcbio-nextgen
Best-practice pipelines for fully automated high throughput sequencing analysis
CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
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Best-practice pipelines for fully automated high throughput sequencing analysis
Join overlapping paired-end Illumina reads
CGAT - Computational Genomics Analysis Tools
Trawler is a integrated pipeline for the analysis of large scale chromatin-immunoprecipitation (ChIP) data and other large scale DNA-RNA datasets.