sneumann/pwiz-appliance
The pwiz appliance provides a virtual machine image with an installation of the http://proteowizard.sourceforge.net/ under wine, which allows conversion of Mass Spectrometry vendor formats under Linux.
rISAtab allows to access metadata/data in ISA-tab format and build Bioconductor data structures. Currently, data generated from microarray and flow cytometry assays are supported. The package is extendable, and efforts are undergoing to support metadata associated to proteomics and metabolomics-based assays (i.e. mass spectrometry).
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The pwiz appliance provides a virtual machine image with an installation of the http://proteowizard.sourceforge.net/ under wine, which allows conversion of Mass Spectrometry vendor formats under Linux.
This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/mtbls2.html Contributions: http://www.ebi.ac.uk/metabolights/MTBLS2, https://github.com/sneumann/mtbls2. Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=mtbls2.
This is a copy of the upstream http://sourceforge.net/projects/efpbrowser/ by Nicholas Provart at http://www.bar.utoronto.ca
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