rob-p/quip
Compressing next-generation sequencing data with extreme prejudice.
Public GitHub Catalog
Discovered Sep 25, 2026
rob-p / ScalaIntro
A small set of Scala examples & links for a brief Scala introduction given at UMD
About this discovery
This repository is cataloged as part of our automated global GitHub synchronization. Full telemetry, velocity snapshots, and code summaries are scheduled for continuous enrichment.
#3649198GitHub System ID
rob-pOrganization / User
PublicVisibility
ActiveCatalog Status
More from rob-p
rob-p/Jellyfish
Fork of the jellyfish kmer counter. Here is the description copied from their site: JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism. JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish stats" command. See the documentation below for more details.
rob-p/course
Source code for the applications presented in the course "Geometry Processing with Discrete Exterior Calculus"
rob-p/cpp11fun
A small set of examples demonstrating features of C++11