raphael-group/multibreak-sv
MultiBreak-SV identifies structural variants from next-generation paired end data, third-generation long read data, or data from a combination of sequencing platforms.
HotNet2 is an algorithm for finding significantly altered subnetworks in a large gene interaction network
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MultiBreak-SV identifies structural variants from next-generation paired end data, third-generation long read data, or data from a combination of sequencing platforms.
A web application from the Raphael Lab for mutation annotation and genome interpretation.
Raphael group website.
Tumor Heterogeneity Analysis (THetA) and THetA2 are algorithms that estimate the tumor purity and clonal/subclonal copy number aberrations directly from high-throughput DNA sequencing data. This repository includes the updated algorithm, called THetA2.