olgabot/sj2psi
Convert RNA-STAR aligner "SJ.out.tab" files to "Percent spliced-in" (Psi) scores
RNA-Sequencing data differential expression analysis pipeline. Performs: genome coverage (via bedtools and HTSeq), generates Circos code and plots, differential expression (via DESeq and NOISeq), structural variant detection (e.g. fusion genes, via SVDetect) and differential exon usage (via DEXSeq).
This repository is cataloged as part of our automated global GitHub synchronization. Full telemetry, velocity snapshots, and code summaries are scheduled for continuous enrichment.
Convert RNA-STAR aligner "SJ.out.tab" files to "Percent spliced-in" (Psi) scores
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Hosted MIT License with details controlled through this repo
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