mlawrenz/clusterLP-MPI
Cluster a protein-ligand system with RMSD using separate sets of atoms for the alignment and distance computation.
python scripts for processing surflex docking output
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Cluster a protein-ligand system with RMSD using separate sets of atoms for the alignment and distance computation.
K-Centers clustering on tanimoto scores for overlap of ligands (or anything else)
scripts for analyzing protein-ligand simulations
python program for creating 3d PMFs and computing binding free energies from protein-ligand binding simulations.