mbusby/Process-Genes-In-A-Bam-File
This is the custom script that was used to calculate FPKM in Smanski et al. 2014
This is a script that makes a matrix of KMers present in a FASTQ file.
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This is the custom script that was used to calculate FPKM in Smanski et al. 2014
Processes a bam file to get all of the alignments for a random set of reads.
Creates a rarefaction curve to measure complexity in RNA Seq data using start position
The back end files for the Scotty app. Check ReadMe for version issues.