jrherr/ConditionallyRareTaxa
R scripts and tutorial datasets to detect conditionally rare taxa in time series of microbial communities
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
This repository is cataloged as part of our automated global GitHub synchronization. Full telemetry, velocity snapshots, and code summaries are scheduled for continuous enrichment.
R scripts and tutorial datasets to detect conditionally rare taxa in time series of microbial communities
Lesson on using the SQL for ecology
A collection of scripts developed to interact with fasta, fastq and sam/bam files.
Convert QIIME files into Oligotyping subsets.