josephryan/FastqSifter
Separate contaminating reads from FASTQ files (e.g., mitochondria, symbionts, bacterial or human contaminants)
identify BLAST hits between two datasets by employing a third intermediate dataset
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Separate contaminating reads from FASTQ files (e.g., mitochondria, symbionts, bacterial or human contaminants)
Repository for supplementary materials produced by the Ryan Lab
make artificial mate pairs from long sequences for scaffolding
compare genome assemblies using sequence similarity to transcript or protein sequences from a different species.