jnpaulson/phyloseq
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
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phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
Public repository.
Support for the biom file format in R/Bioconductor, versions 1.x (JSON) as well as 2.x (HDF5)
Devel branch of epivizr bioconductor package