gatoravi/svviz
Read visualizer for structural variants
DeNovoGear with BetaBinomial likelihoods for paired sample mutation calling. For example this package can be used to do tumor vs normal comparisons. The BetaBinomial likelihood model has been shown to have a higher sensitivity and specificity compared to the binomial model.
Public repository record indexed from GitHub. Explore verified star velocity metrics, source code repositories, and curated developer tool directories across the GitHubRepo ecosystem.
Read visualizer for structural variants
A series of scripts to make panel plots for CNVs and regions of LOH across the genome.
Genome data visualizations
Unofficial repo for software vendoring or packaging purposes