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Public GitHub Catalog Discovered Oct 21, 2026

brendanofallon / pysam

Pysam is a python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API. Pysam also includes an interface for tabix.

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brendanofallon/StreamSorter

A multithreaded sorting utility that reads from a stream and can be used for very large datasets. Designed to work well with next generation sequencing data sets.

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