biocyberman/piper
A genomics pipeline build on top of the GATK Queue framework
SparkleShare is an Open Source collaboration and sharing tool that is designed to keep things simple and to stay out of your way. It allows you to instantly sync with Git repositories and is available for Linux distributions, Mac and Windows.
This repository is cataloged as part of our automated global GitHub synchronization. Full telemetry, velocity snapshots, and code summaries are scheduled for continuous enrichment.
A genomics pipeline build on top of the GATK Queue framework
A set of tools (in Java) for working with next generation sequencing data in the BAM (http://samtools.github.io/hts-specs) format.
GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only
An attempt to create one-stop documentation for Broad Institute's GATK and Queue tools. This aims to produce one final file in HTML or PDF to view offline, online or even printing if needed..