benedictpaten/cPecan
C + python code for pairwise multiple sequence alignment, pulling out this functionality from the Cactus alignment program.
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Discovered Oct 21, 2026
benedictpaten / toil
Python based pipeline management software for clusters that makes running recursive and dynamically scheduled computations straightforward. So far works with gridEngine, lsf, parasol and on multi-core machines.
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benedictpaten/marginAlign
UCSC Nanopore
benedictpaten/RefVariationTaskTeam
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benedictpaten/pinchesAndCacti
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