LeeKamentsky/cellh5
CellH5 is an HDF5 data format for cell-based assays in high-throughput microscopy, which stores high-dimensional image data along with inter-object relations in graphs.
Image Processing SciKit (Toolbox for SciPy)
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CellH5 is an HDF5 data format for cell-based assays in high-throughput microscopy, which stores high-dimensional image data along with inter-object relations in graphs.
A Java/swing backend for Matplotlib using the javabridge
A GUI tool that quantifies the amount of stain in organelles segmented out of a 3D stack.
A Python wrapper around FastEMD by Ofir Pele