Honglongwu/MuSiC2
identifying mutational significance in cancer genomes
Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved Domain Database and Nucleotide divisions, Gene Ontology, UniPathways and the Enzyme Commission. It gives information about the longest ORF (using DNA2PEP) and non-coding potential of the sequences (using Portrait). A final heuristic makes Annocript able to identify putative long non-coding RNAs among your transcripts.
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identifying mutational significance in cancer genomes
Bioconductor cheat sheet
Classical equations and diagrams in machine learning
Implementation of the k-modes clustering algorithm for categorical data, and several of its variations.