xshang/classify
Public repository.
Developer Profile
xshang
Discovered public repositories for xshang in the GitHub catalog.
xshang/ml_hackers
Machine Learning For Hackers 中文版
xshang/bigrf
Random forests for R for large data sets, optimized with parallel tree-growing and disk-based memory
xshang/pyngs
Process Next Generation Sequencing Data by python
xshang/bcbb
Useful bioinformatics code, primarily in Python and R
xshang/GenoBox
Alignment, Assembly and Genotyping of NGS data
xshang/ribomatic
Bacterial population diversity analysis (Illumina 16S)
xshang/pandaseq
PAired-eND Assembler for DNA sequences
xshang/rna-seq-diff-exprn
RNA-Sequencing data differential expression analysis pipeline. Performs: genome coverage (via bedtools and HTSeq), generates Circos code and plots, differential expression (via DESeq and NOISeq), structural variant detection (e.g. fusion genes, via SVDetect) and differential exon usage (via DEXSeq).
xshang/jsbi_chipseq
ChIP-seq data analysis with R + Bioconductor
xshang/Decombinator
tool for analysis of T cell receptor repertoires
xshang/work-efficient
find tools to make work efficiently