xguse/my-recipes
My recipes
Developer Profile
xguse
Discovered public repositories for xguse in the GitHub catalog.
xguse/BioGeoBEARS
BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts
xguse/trenderbot
twitter app to notify you of trends that might be interesting to you
xguse/trender
twitter app to notify you of trends that might be interesting to you
xguse/reveal.js
The HTML Presentation Framework
xguse/reveal-md
reveal.js on steroids! Get beautiful reveal.js presentations from your Markdown files
xguse/md2reveal
A script to easily convert (simple) markdown to reveal html.
xguse/Fogger
Create sandboxed web apps as desktop applications.
xguse/TAMO
Python package for bioinformatics motif analysis
xguse/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
xguse/biopython
Official git repository for Biopython (converted from CVS)
xguse/matplotlib
matplotlib: plotting with Python
xguse/BiBench
BiBench is a Python library designed to simplify biclustering tasks.
xguse/ipython
Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.
xguse/motility
Public repository.
xguse/Combinatorics
This set of basic combinatorics functions supplements Python's itertools module.
xguse/uci-thesis-latex
LaTeX template for thesis and dissertation documents at UC Irvine
xguse/gfunc
Public repository.
xguse/ipy_notebooks
my ipython notebooks
xguse/spartan
A spartan bioinformatics package, providing only the essentials and nothing fancy or luxurious. Enough to get the job done quickly without flourish.
xguse/pycrumbs
Bits and bytes of Python from the Internet
xguse/tinkerer
Python blogging engine
xguse/bitdeli-docs
Bitdeli Documentation
xguse/blacktie_test_data
set of faked fastqs and genome seq/annotations to use to test new blacktie releases
xguse/movingthelamppost
My personal blog about being a scientist in the era of 'big data' and 'small funding'.
xguse/bump
Bumps version numbers
xguse/gcc
Public repository.
xguse/blacktie
Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline
xguse/ete
ETE is a python programming toolkit that assists in the automated manipulation, analysis and visualization of any type of hierarchical trees. This includes phylogenetic trees, clustering results and profile-based trees. It supports node annotation, programatic tree drawing, circular visualization, SVG, PNG and PDF image rendering, and more!
xguse/gProj
A personal project management application based on task inputs/outputs rather than timelines. /*NOT ready for consumption*/
xguse/rSeqPipeline
personal RNAseq analysis pipeline for the lab
xguse/scipherPyProj
Collection of bioinformatic python code.
xguse/gusPyProj
Public repository.
xguse/test
Public repository.
xguse/customTAMO
Repo for my changes to the TAMO framework