wikipathways/pvjson2gpml-js
Convert biological pathway data from pvjson1.0 (json) to GPML 2013a (XML).
Discovered public repositories for wikipathways in the GitHub catalog.
Convert biological pathway data from pvjson1.0 (json) to GPML 2013a (XML).
Public repository.
Convert GPML (WikiPathways XML format) to JSON-LD
Convert Biopax OWL (rdf/xml) data to JSON-LD
JS client for WikiPathways.org API
Script to Upload Reactome pathways in Wikipathways using the Wikipathways webservice
Java client library for WikiPathways webservice
Java source for conversion of WikiPathways GPML to triples
JavaScript-based pathway viewer and editor
Reads in a GPML file an writes out the newest GPMl version (independent of the GPML version in the file)
Converts Reactome pathways to GPML format
Uses GO-Elite to find over represented GO terms for a pathway based on the genes in the pathway.
WikiPathways app for Cytoscape to open and access pathways from WikiPathways
Unit tests that validate the WikiPathways content and support the curation of the knowledge base.