vals/SdA
Stacked denoising Autoencoder dimennsionality reduction
Discovered public repositories for vals in the GitHub catalog.
Stacked denoising Autoencoder dimennsionality reduction
Quil based scatterplot frontend which plots squares from a backend mongodb database.
Tool to easily start up an IPython cluster on different schedulers.
Public repository.
Mu Ren Zhuang is an exercise form to practice Code Flexibility - something I have not seen before
Python implementation of "MAPPER: PARTIAL CLUSTERING IN MATLAB"
Google devnull stockholm competition
Fast multi-line FASTA/Q reader in several programming languages
Ratatosk extension for use at Science for Life Laboratory
Public repository.
FinalVersions
Python Koans - Learn Python through TDD
Public repository.
Small examples showing that amqp messaging silently fails in multiprocessing pool
Public repository.
A cool logging replacement for Python. Under construction
Public repository.
Public repository.
Scilifelab-specific code for bcbio-nextgen, linked via git submodules
Adhoc software "packaged" for the ancient and deprecated "module system" (http://modules.sf.net/)
Tornado web app for visualizing information and statistics regarding SciLifeLab Genomics platform operations.
Parallel Computing: Theory - Hardware - Software with Special Focus on Multi-Core Programming
Misc code snippets for Science For Life Laboratory
Experimentation with battledhip strategies
Useful bioinformatics code, primarily in Python and R
Image Processing SciKit (Toolbox for SciPy)
Public repository.