usuyama/hapmuc_simulation
data sets and scripts for simulation
Developer Profile
usuyama
Discovered public repositories for usuyama in the GitHub catalog.
usuyama/sam_simulator
Public repository.
usuyama/variant_parser
get variants (mismatches and indels) from CIGAR and MD of sam format with Ruby and C++
usuyama/beta-binomial_parameter_estimation
Public repository.
usuyama/tangotyou
Public repository.
usuyama/dict_history
chrome extension that saves the English word when the user search the word
usuyama/sbt-elasticbeanstalk
SBT Play2 plugin for deploying WAR files to Amazon Web Services (AWS) Elastic Beanstalk
usuyama/intersect_bed_with_genotype
intersect bed + check if genotype is same
usuyama/EBCall
an empirical Bayesian framework for mutation detection from cancer genome sequencing data
usuyama/simulate_sam
Public repository.
usuyama/hapmuc
HapMuC: Somatic Mutation Calling Using Heterozygous Germ Line Variants Near Candidate Mutations (Bioinformatics)
usuyama/simulate_fastq
fastq simulater with snv and indel for somatic mutation caller.
usuyama/mutated_sam_generator
simulator for mutation caller. outputs sam format with indel or snp.
usuyama/fisher_exact_test
fisher's exact test for C++ for 2x2 contingency table
usuyama/genomon
Public repository.
usuyama/somatic-sniper
Public repository.
usuyama/hosousu-server
Public repository.
usuyama/rails
Ruby on Rails
usuyama/yjfactory
Public repository.
usuyama/volun
volun