timnugent/wrapup
Skeleton for wrapping a C/C++ Library in Python
Developer Profile
timnugent
Discovered public repositories for timnugent in the GitHub catalog.
timnugent/spectral
Spectral clustering using K-means and a radial basis function kernel matrix [machine learning]
timnugent/neural-net
Backpropogation artificial neural network using stochastic gradient descent [machine learning]
timnugent/kpca-eigen
Kernel principal component analysis using the Eigen linear algebra library [machine learning]
timnugent/kridge-regression
Kernel ridge regression and OLS tools using the Eigen linear algebra library [statistics]
timnugent/kernel-density
Multivariate kernel density estimation [statistics]
timnugent/logistic-regression-sgd
L1-regularized logistic regression using stochastic gradient descent [machine learning]
timnugent/naive-bayes
Naïve Bayes classifier with gaussian, multinomial and bernoulli decision rules [machine learning][statistics]
timnugent/jglcov
Sparse inverse covariance estimation using the joint graphical lasso [bioinformatics][statistics]
timnugent/film3x
Modification of FILM3 algorithm to incorporate membrane potential term [bioinformatics]
timnugent/memsat-svm
Transmembrane protein topology prediction using support vector machines [machine learning][bioinformatics]
timnugent/pdb-complex
Generate and compare graphical representations of protein complexes [bioinformatics]
timnugent/celeste
Identify clouds in images using support vector machines for enhanced panoramic stitching [machine learning][photography]
timnugent/gtimelapse
Linux application for capturing timelapse videos [photography]
timnugent/psicov-dirichlet
Modified version of PSICOV algorithm, replacing pseudocounts with dirichlet priors [bioinformatics][statistics]
timnugent/drawtransmembane
Perl modules for drawing cartoon and schematic representations of transmembrane proteins [bioinformatics]
timnugent/hhlipex
Lipid exposure prediction using support vector machines and hhblits profiles [machine learning][bioinformatics]
timnugent/memembed
Membrane protein orientation using a genetic algorithm and knowledge-based statistical potential [bioinformatics]